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11 Open 134 Closed
11 Open 134 Closed
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Issues list

BED parsing not fully compliant with spec enhancement testing
#189 opened May 18, 2022 by mdshw5
@mdshw5
Make line endings survive round-trip enhancement known might do
#170 opened Dec 8, 2020 by mdshw5
Enable pyfaidx to accept gcp paths for compressed fasta files
#161 opened May 21, 2020 by archanaraja
2
Index failes if more than one empty line bug
#160 opened Feb 6, 2020 by openpaul
@mdshw5
3
BGZip slow performance near end of chromosomes
#153 opened Jul 26, 2019 by davmlaw
3
Rewrite documentation
#136 opened Feb 5, 2018 by mdshw5
Sequence.gc methods that consider IUPAC nucleotide ambiguity
#128 opened Nov 13, 2017 by mdshw5
@mdshw5
Extend Faidx so it can be backed by memory mapped file enhancement help-wanted
#95 opened Aug 4, 2016 by dhauge
1
--gtf option to read regions from transcript definitions enhancement help-wanted
#90 opened Feb 23, 2016 by mdshw5
Filter [:,] from region string when using UCSC style regions
#89 opened Jan 8, 2016 by mdshw5
@mdshw5
Support for indels in FastaVariant class help-wanted
#84 opened Dec 17, 2015 by danielecook
4
ProTip! Exclude everything labeled bug with -label:bug.