Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
The
checkm
conda environment was broken. Somehow the latest version ofcheckm
has dependencies that are not found in thebioconda
channel, we therefore need to add theconda-forge
channel. Moreovercheckm
is broken for newer versions of python which do not incorporate setuptools, so we add that as a dependency as well.We also add a new test suite, testing that all environments work and update the release process in the README accordingly.
Checklist