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141 Open 33 Closed
141 Open 33 Closed
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Issues list

Convert anndata
#186 opened Jan 8, 2025 by Cran73
Error while using LoadH5Seurat : "Error in sparseMatrix(i = x[["indices"]][] + 1, p = x[["indptr"]][], x = x[["data"]][], : 'p' must be a nondecreasing vector"
#185 opened Oct 28, 2024 by ellenbouchard
Converting the data from Seurat to Anndata
#184 opened Jul 11, 2024 by TakuroIwami
4
Possible solution for converting categorical variable (factor) to proper text categoricals in H5AD
#183 opened Jun 25, 2024 by mvfki
1
a perplexing error while converting H5AD to a Seurat object.
#182 opened Jun 24, 2024 by TATABOX99
1
error #000: ../../../src/H5D.c in H5Dvlen_reclaim(): line 732: invalid argument
#181 opened May 9, 2024 by mayanbriller
1
Efficiently import gene expression values for a selected gene.
#180 opened Apr 3, 2024 by le-raman
seurat-disk installation in r
#179 opened Mar 20, 2024 by yulchen810
1
Error in adding RNA assay
#178 opened Mar 15, 2024 by eblchen
1
saves only the variable features
#177 opened Mar 3, 2024 by SofyaMa
1
error:not a sparse matrix when converting h5ad to Seurat
#176 opened Mar 1, 2024 by gmcregis
1
Error: 'H5ADToH5Seurat' is not an exported object from 'namespace:SeuratDisk'
#175 opened Mar 1, 2024 by Flu09
trouble converting SeuratObject to h5ad
#174 opened Feb 21, 2024 by ncedi12
1
Problem with loading a h5seurat file with LoadH5Seurat
#173 opened Jan 20, 2024 by ghost
Creating a H5Seurat object error
#172 opened Dec 19, 2023 by CeciPR
7
Error for LoadH5Seurat: Too many values for levels provided
#171 opened Dec 15, 2023 by Biolz
3
Export to h5ad from BPCells based Seurat object
#170 opened Nov 28, 2023 by royfrancis
Error in SaveH5Seurat() : HDF5-API Errors
#168 opened Nov 6, 2023 by ys910111
1
Error: Unknown file type: h5seurat
#166 opened Oct 25, 2023 by aodainic7
6
SeuratDisk install
#165 opened Oct 2, 2023 by SaharBJ
Seurat Object not closing when using SaveH5Seurat
#164 opened Sep 21, 2023 by pshukla63
1
Scaling after conversion from anndata to seurat object
#163 opened Sep 13, 2023 by pmarzano97
Error when converting h5Seurat to h5ad
#162 opened Aug 31, 2023 by zoan128
11
Only a subset of scaled data available in .X
#161 opened Aug 7, 2023 by tessadgreen
Export all reductions in h5ad
#160 opened Jul 27, 2023 by bellenger-l
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