updated automation scripts, and bugfix fixed filenames. #37
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RoanKanninga
reviewed
May 8, 2024
bin/ConcordanceCheck.sh
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| module load "${ConcordanceCheckVersion}" | ||
| module load "${nextflowVersion}" | ||
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| "${EBROOTNEXTFLOW}/nextflow" run /apps/software/ConcordanceCheck/beta/nextflow/main.nf \\ |
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hier staat nog hardgecodeerd een verwijzing naar ConcordanceCheck/beta
RoanKanninga
reviewed
May 8, 2024
bin/ConcordanceCheck.sh
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| module load "${ConcordanceCheckVersion}" | ||
| module load "${nextflowVersion}" | ||
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| "${EBROOTNEXTFLOW}/nextflow" run "${EBROOTCONCORDANCECHECK}nextflow/main.nf" \\ |
RoanKanninga
reviewed
May 8, 2024
bin/ConcordanceCheck.sh
Outdated
| module load "${nextflowVersion}" | ||
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| "${EBROOTNEXTFLOW}/nextflow" run "${EBROOTCONCORDANCECHECK}nextflow/main.nf" \\ | ||
| -main-script "${EBROOTCONCORDANCECHECK}/nextflow/main.nf" \\ |
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en je gebruikt hier nogmaals dezelfde workflow?
RoanKanninga
approved these changes
May 22, 2024
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