la til konfigurasjon for azure

imongrazure/Dockerfile

@@ -0,0 +1,3 @@
+FROM openanalytics/shinyproxy:3.1.1
+
+COPY application.yml /opt/shinyproxy/application.yml

imongrazure/application.yml

@@ -0,0 +1,54 @@
+proxy:
+  title: imongrproxy
+  logo-url: https://raw.githubusercontent.com/mong/imongr/main/pkgdown/favicon/apple-touch-icon-152x152.png
+  favicon-path: /opt/shinyproxy/favicon.ico
+  hide-navbar: true    
+  landing-page: /app_direct/imongr
+  port: 8080
+  container-wait-time: 20000
+  docker:
+    internal-networking: true
+    image-pull-policy: Always 
+    heartbeat-rate: 10000
+    heartbeat-timeout: 60000
+  authentication: openid
+  admin-groups: manager
+  openid:
+    auth-url: https://#-imongr.skde.org/oauth2/authorize
+    token-url: https://#-imongr.skde.org/oauth2/token
+    jwks-url:  https://cognito-idp.eu-west-1.amazonaws.com/eu-west-1_ltXTLvLq6/.well-known/jwks.json
+    client-id: ${OPENID_CLIENT_ID}
+    client-secret: ${OPENID_CLIENT_SECRET}
+    roles-claim: cognito:groups
+    logout-url: https://#-imongr.skde.org/logout?client_id=${OPENID_CLIENT_ID}&logout_uri=https://imongr-test-hrhcfabjese9dbdd.a03.azurefd.net/logout-success
+  specs:
+    - id: imongr
+      display-name: imongr
+      container-cmd: ["R", "-e", "options(shiny.port=3838,shiny.host='0.0.0.0'); imongr::run_app()"]
+      container-image: hnskde/imongr:${APPLICATION_IMAGE_TAG}
+      container-network: mongr_net  
+      container-env:
+        IMONGR_DB_HOST: ${IMONGR_DB_HOST}
+        IMONGR_DB_HOST_QA: ${IMONGR_DB_HOST}
+        IMONGR_DB_HOST_VERIFY: ${IMONGR_DB_HOST}
+        IMONGR_DB_NAME: ${IMONGR_DB_NAME}
+        IMONGR_DB_USER: ${IMONGR_DB_USER}
+        IMONGR_DB_PASS: ${IMONGR_DB_PASS}
+        IMONGR_ADMINER_URL: ${IMONGR_ADMINER_URL}
+        distribution_id: E2ANX0NUJHAHCF
+  container-log-path: /opt/shinyproxy/logs/container-logs
+server:
+  useForwardHeaders: true
+  forward-headers-strategy: native
+  servlet.session.timeout: 12200
+spring:
+  servlet:
+    multipart:
+      max-file-size: 90MB
+      max-request-size: 100MB    
+logging:
+  file:
+    name: /opt/shinyproxy/logs/shinyproxy.log
+    max-size: 1MB
+    total-size-cap: 10MB
+  level: INFO

imongrazure/docker-compose.yml

@@ -0,0 +1,28 @@
+services:
+  shinyproxy:
+    build: .
+    restart: unless-stopped
+    container_name: shinyproxyazure
+    environment:
+      IMONGR_DB_HOST: ${IMONGR_DB_HOST}
+      IMONGR_DB_NAME: ${IMONGR_DB_NAME}
+      IMONGR_DB_USER: ${IMONGR_DB_USER}
+      IMONGR_DB_PASS: ${IMONGR_DB_PASS}
+      IMONGR_ADMINER_URL: ${IMONGR_ADMINER_URL}
+      OPENID_CLIENT_ID: ${OPENID_CLIENT_ID}
+      OPENID_CLIENT_SECRET: ${OPENID_CLIENT_SECRET}
+      distribution_id: ${distribution_id}
+      APPLICATION_IMAGE_TAG: ${APPLICATION_IMAGE_TAG}
+    volumes:
+      - /var/run/docker.sock:/var/run/docker.sock
+      - /var/log/shinyproxy/:/opt/shinyproxy/logs/
+    ports:
+      - 8080:8080
+    networks:
+      - mongr_net
+    logging:
+      driver: json-file
+networks:
+  mongr_net:
+    name: mongr_net
+

imongrazure/start.sh

@@ -0,0 +1,25 @@
+# Har lagt til azureuser i docker
+# sudo usermod -aG docker azureuser
+
+# Har lagt inn tillatelse til docker.sock i /etc/systemd/system/docker.service.d/override.conf
+# [Service]
+# ExecStart=
+# ExecStart=/usr/bin/dockerd -D -H tcp://127.0.0.1:2375 -H unix://
+# ExecStartPost=/bin/sh -c 'chown azureuser:docker /run/docker.sock'
+#
+#
+
+# Har lagt inn log-directories
+#sudo mkdir -p /var/log/shinyproxy
+#sudo chown -R azureuser:docker /var/log/shinyproxy/
+#sudo chmod -R 755 /var/log/shinyproxy/
+#sudo mkdir -p /var/log/shinyproxy/container-logs
+#sudo chown -R azureuser:shinyproxy /var/log/shinyproxy/container-logs
+#sudo chmod -R 755 /var/log/shinyproxy/container-logs
+
+# Automatisk sletting av gamle container-logger gjøres med crontab (crontab -e)
+# 0 0 * * * /usr/bin/find /var/log/shinyproxy/container-logs -name "*.log" -type f -mtime +7 -exec rm -f {} \;
+
+docker-compose down
+docker-compose up --build -d
+