Uneek is a simple C++ program that takes two read files as input and prints the unique reads in the second file.
To install uneek
$ git clone repo
$ cd uneek
$ make
To use uneek, run it like this:
$ ./uneek file1 file2
The output should be a series of lines that are unique to the second file.
Uneek can also be built in debug mode by doing the following:
$ make debug
This enables the built-in print statements to show you the various stages of parsing reads.
Should you ever need to remove uneek you can do so via the following:
$ make clean
This will remove the executable and any object files.
Version 1.0
Name: Michael Robson
Email: mprobson@illinois.edu
Twitter: @mprobson
GNU LGPLv3