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fix container/env for metafusion_geneinfo
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Anne Marie Noronha committed Apr 14, 2024
1 parent 072a4ed commit c3c8759
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions modules/local/metafusion/geneinfo/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -4,8 +4,8 @@ process METAFUSION_GENEINFO {

conda "${moduleDir}/environment.yml"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'ghcr.io/rocker-org/devcontainer/tidyverse:4':
'ghcr.io/rocker-org/devcontainer/tidyverse:4' }"
'https://depot.galaxyproject.org/singularity/mulled-v2-28e4eeae4055c6901c8218fe9e55d342d59035ef:0b59d552b4c1c8b2845385236f1053a7e1fb80c6-0' :
'quay.io/biocontainers/mulled-v2-28e4eeae4055c6901c8218fe9e55d342d59035ef:0b59d552b4c1c8b2845385236f1053a7e1fb80c6-0' }"

input:
tuple val(meta), path(gtf)
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