Skip to content

Issues: ndaniel/fusioncatcher

New issue

Have a question about this project? # for a free GitHub account to open an issue and contact its maintainers and the community.

#

By clicking “#”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? # to your account

39 Open 176 Closed
39 Open 176 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Fusions between unannotated transcribed DNA regions
#227 opened Dec 6, 2024 by balayev1
Multiple version of MySQL on ensembl FTP causes error in get_synonyms.py
#226 opened Dec 6, 2024 by ktmf1991
How to output FusionCatcher predicted gene fusions in BEDPE format?
#225 opened Nov 8, 2024 by SysLuke
6
feature request: report transcripts
#224 opened Oct 31, 2024 by anoronh4
Issue Encountered While Running FusionCatcher
#223 opened Aug 20, 2024 by WANGW-z
Predicted_fused_transcripts and Predicted_fused_proteins columns are missing
#222 opened Aug 6, 2024 by makarov-ccf
Error downloading Canis lupus familiaris genome from Ensembl
#221 opened Aug 6, 2024 by SeungWWoo
get_synonyms.py fails to infer the right URL
#220 opened Jul 5, 2024 by priesgo
1
Change --link hard to --link soft to be run in Tower
#219 opened Mar 1, 2024 by projassanchez
Any plan to make a release incorporating EnSEML v110 - GENCODE v44 ?
#218 opened Nov 16, 2023 by af8
1
Python 2.7 to 3.0?
#217 opened Nov 3, 2023 by jdjdj0202
Bowtie2 and STAR cat different psl ?
#216 opened Oct 20, 2023 by nihilee
Please add annotation of fusion breakpoint to predicted protein sequence
#215 opened Oct 18, 2023 by GHosking-01
Database build
#214 opened Aug 18, 2023 by km-2021
Error installing fastqtk for fusioncatcher
#213 opened Aug 14, 2023 by pirateyoho
FusionCatcher misses an EGFR:EGFR fusion (deletion exon 2 to 7)
#212 opened Jul 11, 2023 by eliasOnAWS
Issues installing with bioconda
#211 opened Jul 6, 2023 by pirateyoho
Does Fusioncatcher filter results based on supporting reads?
#210 opened May 12, 2023 by paulwittgenstein
why fusioncatcher didn't work until the sencond run?
#208 opened Feb 23, 2023 by windtalker6
1
ERROR: Too long read sequence found.
#204 opened Sep 20, 2022 by li1ba
1
not-converted+
#202 opened Sep 7, 2022 by hanxuelian
default number of CPUs
#201 opened Aug 31, 2022 by EricDeveaud
Meaning of tags 't3, t4, t7' etc in fusion description column
#200 opened Aug 18, 2022 by asmitagpta
2
Possibility of Python 3 Port
#199 opened Jul 21, 2022 by greenbagels
2
Correct fusion reported but false positions for MYC gene and IGH@ locus
#198 opened Jun 27, 2022 by pkerbs
1
ProTip! Mix and match filters to narrow down what you’re looking for.