Add MEME suite installation to rworkflows

.github/workflows/rworkflows.yml

@@ -34,6 +34,26 @@ jobs:
           bioc: release
           r: auto
     steps:
+    - name: Install MEME suite
+      run: |
+        memeversion = 5.5.5
+        wget http://meme-suite.org/meme-software/$version/meme-$memeversion.tar.gz
+        tar zxf meme-$memeversion.tar.gz
+        cd meme-$memeversion
+        ./configure --prefix=$HOME/meme --with-url=http://meme-suite.org/ --enable-build-libxml2 --enable-build-libxslt
+        make
+        make test
+        make install
+    - name: Set MEME_BIN environment variable
+      run: echo "MEME_BIN=$HOME/meme/bin" >> $GITHUB_ENV
+    - name: Check for ame in MEME suite bin
+      run: |
+        if [ ! -f "$HOME/meme/bin/ame" ]; then
+          echo "ame executable not found in $HOME/meme/bin"
+          exit 1
+        fi
+        echo "MEME suite (version $memeversion) successfully installed."
+        echo "MEME suite bin path: $MEME_BIN"
     - uses: neurogenomics/rworkflows@master
       with:
         run_bioccheck: ${{ true }}