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Pull requests: nf-core/modules

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Pull requests list

Pypgx small batch update Ready for Review
#8377 opened Apr 29, 2025 by Jorisvansteenbrugge Loading…
7 of 8 tasks
1
Add new module Quilt2
#8375 opened Apr 29, 2025 by LouisLeNezet • Draft
17 tasks
Add stub and stub test to snpsift/split module update module
#8370 opened Apr 27, 2025 by jonasscheid Loading…
1 of 17 tasks
6
Add wishlist functionality to manage issues
#8369 opened Apr 25, 2025 by famosab Loading…
17 tasks
1
change links test-data to sarscov
#8366 opened Apr 25, 2025 by nschan Loading…
3
add new module rtgtools/bndeval
#8365 opened Apr 25, 2025 by kubranarci Loading…
9 of 17 tasks
1
@kubranarci
4
Update mapAD to v0.45.0
#8362 opened Apr 24, 2025 by jch-13 Loading…
update cellranger count docker image
#8361 opened Apr 24, 2025 by fmalmeida • Draft
1
6
Migrate khmer/normalizebymedian to nf-test nf-test
#8357 opened Apr 23, 2025 by LouisLeNezet Loading…
17 tasks
1
@LouisLeNezet
6
Fix cellrangerarc/mkfastq gz stub
#8354 opened Apr 23, 2025 by ignatiusm Loading…
17 tasks
1
1
nf-test migration for cellrangerarc/mkfastq
#8353 opened Apr 22, 2025 by ignatiusm • Draft
17 tasks
1
Update GNU
#8349 opened Apr 22, 2025 by DLBPointon Loading…
@DLBPointon
1
DO NOT MERGE: Testing singularity GPU runners
#8332 opened Apr 17, 2025 by mashehu Loading…
Fix prettier linting everywhere
#8323 opened Apr 16, 2025 by jfy133 Loading…
17 tasks
12
longstitch module, tests
#8312 opened Apr 15, 2025 by nschan Loading…
7
srst2/srst2 to nf-test
#8301 opened Apr 14, 2025 by famosab Loading…
17 tasks
1
2
jupyternotebook to nf-test
#8300 opened Apr 14, 2025 by famosab Loading…
17 tasks
1
2
Add eider modules new module Adding a new module WIP Work in progress
#8284 opened Apr 11, 2025 by heuermh • Draft
14 of 17 tasks
1
SENTIEON_BWAMEM license path
#8256 opened Apr 9, 2025 by edmundmiller • Draft
@edmundmiller
Use pre-commit in fix-linting action
#8250 opened Apr 8, 2025 by mashehu Loading…
Earlgrey module WIP
#8249 opened Apr 8, 2025 by cintiaoi Loading…
10 of 17 tasks
fix: nf-test in strelka Ready for Review
#8241 opened Apr 8, 2025 by famosab Loading…
1 of 17 tasks
1
5
Update modules meta-schema.json
#8226 opened Apr 7, 2025 by mirpedrol Loading…
Add new module called rundbcan and subcommands(database, cazymeannotation, easycgc, easysubstrate)
#8216 opened Apr 4, 2025 by Xinpeng021001 Loading…
12 of 17 tasks
50
adds ClairSTO
#8214 opened Apr 4, 2025 by robert-a-forsyth Loading…
12 of 17 tasks
ProTip! Exclude everything labeled bug with -label:bug.