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TableInfo: dcc.tsv
abradyIGS edited this page Mar 3, 2022
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3 revisions
The dcc.tsv
(formerly primary_dcc_contact.tsv
) table must contain exactly one row describing a technical contact for this C2M2 datapackage. This table's project
foreign key (the last two fields) should refer to the artificial top-level entry in the project
table that represents the DCC's total C2M2 submission (see project.tsv
).
Field | Field Description | Required? | Field Value Type | Extra Info |
---|---|---|---|---|
id | The identifier for this DCC, issued by the CFDE-CC. | Required | Example: cfde_registry_dcc:hmp
|
|
dcc_name | A short, human-readable, machine-read-friendly label for this contact's program or DCC | Required | string | This is the display name for your program in the CFDE portal. |
dcc_abbreviation | A very short display label for this contact's program or DCC | Required | string | Should not exceed 10 characters; can only contain 0-9, a-z, A-Z and underscore ("_ "). This is the display abbreviation for your program in the CFDE portal. |
dcc_description | A human-readable description of this contact's program or DCC | Required | string | This is the display description for your program in the CFDE portal. |
contact_email | Email address of this contact | Required | A valid email address | |
contact_name | Name of this contact | Required | string | The name of a person who can answer any questions CFDE staff have during submission processing |
dcc_url | URL of the front page of the website for this contact's program or DCC | Required | A valid URL | Example: https://www.hmpdacc.org/
|
project_id_namespace | The id_namespace of the project record representing the top-level C2M2 metadataset produced by this contact's program or DCC [part 1 of 2-component composite foreign key] | Required | string | This will be the value of 'id_namespace' in the project.tsv table for the overarching project record representing your entire program. |
project_local_id | The local_id of the project record representing the top-level C2M2 metadataset produced by this contact's program or DCC [part 2 of 2-component composite foreign key] | Required | string | This will be the value of local_id in the project.tsv table for the overarching project record representing your entire program. If you have only a single project, this is that project. If you have more than one project, create a 'dummy project' to represent your entire program and contain all other projects (as subprojects: see the project_in_project.tsv table for how to express these relationships). |
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Tutorials
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C2M2 Table Guide
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Table Summary
- analysis_type.tsv
- anatomy.tsv
- assay_type.tsv
- biofluid.tsv
- biosample.tsv
- biosample_disease.tsv
- biosample_from_subject.tsv
- biosample_gene.tsv
- biosample_in_collection.tsv
- biosample_substance.tsv
- collection.tsv
- collection_anatomy.tsv
- collection_biofluid.tsv
- collection_compound.tsv
- collection_defined_by_project.tsv
- collection_disease.tsv
- collection_gene.tsv
- collection_in_collection.tsv
- collection_phenotype.tsv
- collection_protein.tsv
- collection_substance.tsv
- collection_taxonomy.tsv
- compound.tsv
- data_type.tsv
- dcc.tsv (formerly
primary_dcc_contact.tsv
- disease.tsv
- file.tsv
- file_describes_biosample.tsv
- file_describes_collection.tsv
- file_describes_subject.tsv
- file_format.tsv
- file_in_collection.tsv
- gene.tsv
- id_namespace.tsv
- ncbi_taxonomy.tsv
- phenotype.tsv
- phenotype_disease.tsv
- phenotype_gene.tsv
- project.tsv
- project_in_project.tsv
- protein.tsv
- protein_gene.tsv
- subject.tsv
- subject_disease.tsv
- subject_in_collection.tsv
- subject_phenotype.tsv
- subject_race.tsv
- subject_role_taxonomy.tsv
- subject_substance.tsv
- substance.tsv
- Reference Tables
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Table Summary