Skip to content
New issue

Have a question about this project? # for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “#”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? # to your account

Merge summary files into one excel sheet. #246

Closed
AhmedElsherbini opened this issue Oct 4, 2023 · 3 comments
Closed

Merge summary files into one excel sheet. #246

AhmedElsherbini opened this issue Oct 4, 2023 · 3 comments
Labels
enhancement New feature or request

Comments

@AhmedElsherbini
Copy link

Hello, firstly thanks for your nice tool.

For me, as I work with many genomes per run, I just needed a simple feature, which is just merging the summary txt files into one simple Excel sheet. I have already made this simple script named Bakta_stats. I hope it will be easy to use and offer any help to any colleague with similar need.

@AhmedElsherbini AhmedElsherbini added the enhancement New feature or request label Oct 4, 2023
@oschwengers
Copy link
Owner

Hi @AhmedElsherbini ,
thanks for reaching out and your script. Your issue triggered me to add a general script collection directory, see #251 . For mere code maintenance, I re-implemented your script and added another I've written some time ago.

So, thanks a lot!
I'll close this for now, but please, do not hesitate to re-open it just in case, this does not fit your needs or anything else.
Best!

@AhmedElsherbini
Copy link
Author

Thank you very much for your reply.
Kindly, if my script was somehow helpful for you, I would be very grateful for any kind of acknowledgment or reference (up to you). I was also thinking of converting the output of this script into some graphical abstract, as simple as Python matplotlib boxplots or as complex as MultiQC HTML output.

@oschwengers
Copy link
Owner

Of course, proper acknowledgments are self-evident ;-) I normally give credits to everyone somehow involved in the description of each release.

# for free to join this conversation on GitHub. Already have an account? # to comment
Labels
enhancement New feature or request
Projects
None yet
Development

No branches or pull requests

2 participants