2.0.0: Jena Ontology API refactoring

[sszuev]

For the upcoming release v2.0.0, the root domain name has been already changed,
so we can safely modify any other parts of the API.
This is the last chance, after the release, such an opportunity will no longer exist, so need to do it finally.

(note: this is a continuation of the issue https://github.com/avicomp/ont-api/issues/83)

So, there are following propositions:

1) changes in Ont[Graph]Model components naming

• OntSWRL:
  • OntSWRL.Atom.BuiltIn -> OntSWRL.Atom.WithBuiltin
  • OntSWRL.Atom.OntClass -> OntSWRL.Atom.WithClass
  • OntSWRL.Atom.DataRange -> OntSWRL.Atom.WithDataRange
  • OntSWRL.Atom.ObjectProperty -> OntSWRL.Atom.WithObjectProperty
  • OntSWRL.Atom.DataProperty -> OntSWRL.Atom.WithDataProperty
  • OntSWRL.Atom.DifferentIndividuals -> OntSWRL.Atom.WithDifferentIndividuals
  • OntSWRL.Atom.SameIndividuals -> OntSWRL.Atom.WithSameIndividuals
• Entities (OntEntity)
  • OntClass -> OntClass.Named
  • OntDT -> OntDataRange.Named
  • OntNOP -> OntObjectProperty.Named
  • OntNAP -> OntAnnotationProperty
  • OntNDP -> OntDataProperty
• Class and Data Range expressions :
  • OntCE -> OntClass
  • OntDR -> OntDataRange
• Property expressions:
  • OntOPE -> OntObjectProperty
  • OntProperty -> OntNamedProperty
  • OntDOP -> OntRealProperty
  • OntPE -> OntProperty
• etc:
  • OntFR -> OntFacetRestriction
  • OntNPA.ObjectAssertion -> OntNegativeAssertion.WithObjectProperty
  • OntNPA.DataAssertion -> OntNegativeAssertion.WithDataProperty

2) changes in methods signatures

• OntStatement#isAnnotation ->isAnnotationAssertion
• OntStatement#isBulkAnnotation -> belongsToAnnotation
• OntResource#getRoot -> getMainStatement
• CreateRanges.* -> uniformity with CreateClasses
  • createOneOfDataRange -> createDataOneOf
  • createComplementOfDataRange -> createDataComplementOf
  • createUnionOfDataRange -> createDataUnionOf
  • createIntersectionOfDataRange -> createDataIntersectionOf
  • createRestrictionDataRange ->
• CreateClasses.* -> uniformity with CreateRanges
  • createOneOf -> createObjectOneOf
  • createComplementOf -> createObjectComplementOf
  • createUnionOf -> createObjectUnionOf
  • createIntersectionOf -> createObjectIntersectionOf
• etc ?

3) remove methods

• OntStatement#isRoot
• OntStatement#isObject
• OntStatement#isData