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1. atacseq atacseq Public template

   Snakemake based pipeline for atacseq dataanalysis

   Python

2. chipseq chipseq Public template

   A snakemake based workflow for ChIPSeq data analysis

   Python

3. create-reference-indices create-reference-indices Public template

   A snakemake workflow to create reference indices and other supplementary files for analysis

   Python

4. dnaseq dnaseq Public archive

   Snakemake based workflow for analysis of dnaseq data for calling germline/somatic mutations

   Python 2

5. rnaseq rnaseq Public template

   Snakemake based pipeline for analysis of rnaseq data

   Python

6. intron-retention-scripts intron-retention-scripts Public archive

   Scripts for intron retention analysis from RNA-Seq data

   Python 1 2