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@populationgenomics

Centre for Population Genomics

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  1. cpg-cost-control cpg-cost-control Public

    A Cloud Function to handle GCP billing budget notifications.

    Python 6 3

  2. production-pipelines production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    Python 6 1

  3. talos talos Public

    Rare Disease variant reanalysis tool

    Python 6 4

  4. cuKING cuKING Public

    CUDA-based KING relatedness estimation

    Cuda 5

  5. seqr seqr Public

    Forked from broadinstitute/seqr

    web-based analysis tool for rare disease genomics

    Python 3 1

  6. cpg-infrastructure cpg-infrastructure Public

    This repository is used to manage the infrastructure at the CPG

    Python 3 1

Repositories

Showing 10 of 65 repositories
  • production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    populationgenomics/production-pipelines’s past year of commit activity
    Python 6 MIT 1 41 (1 issue needs help) 39 Updated Nov 15, 2024
  • cpg-flow Public

    CPG Pipeline Python API

    populationgenomics/cpg-flow’s past year of commit activity
    Makefile 0 MIT 0 2 0 Updated Nov 15, 2024
  • metamist Public

    Sample level metadata system

    populationgenomics/metamist’s past year of commit activity
    Python 1 MIT 1 41 23 Updated Nov 15, 2024
  • hail Public Forked from hail-is/hail

    Scalable genomic data analysis.

    populationgenomics/hail’s past year of commit activity
    Python 1 MIT 249 3 1 Updated Nov 14, 2024
  • sv-workflows Public

    Structural Variation Workflows

    populationgenomics/sv-workflows’s past year of commit activity
    Python 1 MIT 1 2 8 Updated Nov 14, 2024
  • TRTools-segreg Public Forked from gymrek-lab/TRTools

    Toolkit for genome-wide analysis of tandem repeats

    populationgenomics/TRTools-segreg’s past year of commit activity
    Python 0 MIT 22 0 0 Updated Nov 14, 2024
  • images Public

    Reusable single-software docker images

    populationgenomics/images’s past year of commit activity
    Dockerfile 1 MIT 1 2 8 Updated Nov 14, 2024
  • talos Public

    Rare Disease variant reanalysis tool

    populationgenomics/talos’s past year of commit activity
    Python 6 MIT 4 11 3 Updated Nov 14, 2024
  • Talos_AF Public

    A Talos-like tool for identifying ACMG Actionable Findings in large cohorts

    populationgenomics/Talos_AF’s past year of commit activity
    0 MIT 0 0 0 Updated Nov 14, 2024
  • TRTools-nonlinear-sum Public Forked from gymrek-lab/TRTools

    Toolkit for genome-wide analysis of tandem repeats

    populationgenomics/TRTools-nonlinear-sum’s past year of commit activity
    Python 0 MIT 22 0 0 Updated Nov 13, 2024

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