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bistro 0.5.0

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@pveber pveber released this 20 Aug 15:28
· 114 commits to master since this release

v0.5.0 2019-08-20 Lyon

new design: 'a workflow evals to 'a

  • workflows can now compute any (serializable) value besides paths

  • list workflows can be spawned for parallel execution

  • execution engine entirely rewritten, still allows exact incremental
    garbage collection

  • templates for bash script can now contain int and string variable
    parts

  • singularity support

  • multinode execution engine

  • HTML reports

  • dynamic memory and processor requirements

  • utils.Repo are best-effort rendered in case of errors

  • many new modules in bioinfo

  • ppx for templates with antiquotations