Skip to content

EOF - README.md #289

EOF - README.md

EOF - README.md #289

Workflow file for this run

# For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag.
# https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions
on:
push:
pull_request:
branches:
- main
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: ubuntu-20.04, r: 'oldrel', scihub_user: 'sen2r_travis_oldrel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
- {os: ubuntu-20.04, r: 'release', scihub_user: 'sen2r_travis_release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
- {os: ubuntu-20.04, r: 'devel', scihub_user: 'sen2r_travis_devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
- {os: windows-latest, r: 'release', scihub_user: 'sen2r_ci_windows'}
env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
RSPM: ${{ matrix.config.rspm }}
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
SCIHUB_USER: ${{ matrix.config.scihub_user }}
SCIHUB_PASSWORD: ${{ secrets.CI_PASSWORD }}
OS_NAME_STRING: ${{ matrix.config.os }}
R_VERSION_STRING: ${{ matrix.config.r }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
- uses: r-lib/actions/setup-pandoc@v2
- name: "Query dependencies"
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}
- name: "Cache R packages"
if: runner.os != 'Windows'
uses: actions/cache@v2
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
- name: "[Linux] Install system dependencies"
if: runner.os == 'Linux'
run: |
while read -r cmd
do
eval sudo $cmd
done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))')
- name: "[Linux] Install sen2r system dependencies"
if: runner.os == 'Linux'
run: |
sudo apt update
sudo apt install \
gdal-bin \
aria2 \
libpython2-dev \
libudunits2-dev \
libgdal-dev \
libjq-dev \
libprotobuf-dev \
protobuf-compiler \
libv8-dev \
libssl-dev \
libcairo2-dev
- id: 'auth'
uses: google-github-actions/auth@v0
with:
credentials_json: ${{ secrets.GCP_SA_KEY }}
- name: 'Set up Google Cloud SDK'
uses: google-github-actions/setup-gcloud@v0
- name: "Use gcloud CLI"
run: gcloud info
# - name: "Install CRAN {sf}"
# run: |
# remotes::install_cran(c("wk","s2","sf"), force = TRUE)
# shell: Rscript {0}
- name: "Install dependencies"
run: |
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("rcmdcheck")
shell: Rscript {0}
- name: "Check"
env:
_R_CHECK_CRAN_INCOMING_REMOTE_: false
run: |
options(crayon.enabled = TRUE)
rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
shell: Rscript {0}
- name: "Upload check results"
if: failure()
uses: actions/upload-artifact@main
with:
name: ${{ runner.os }}-r${{ matrix.config.r }}-results
path: check