Fixed the bug in generalized procrustes analysis #206
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name: Test Pinned Dependencies | |
on: | |
push: | |
branches: [ main ] | |
pull_request: | |
branches: [ main ] | |
jobs: | |
build_wheels: | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [macos-latest, ubuntu-latest, windows-latest] | |
python-version: ["3.12"] | |
name: Build wheel on ${{ matrix.os }} | |
runs-on: ${{ matrix.os }} | |
defaults: | |
run: | |
# Required when using an activated conda environment in steps | |
# See https://github.com/conda-incubator/setup-miniconda#IMPORTANT | |
shell: bash -l {0} | |
steps: | |
- name: Set environment variables | |
# needed for testing the napari plugin | |
if: matrix.os == 'ubuntu-latest' | |
run: echo "QT_QPA_PLATFORM=offscreen" >> $GITHUB_ENV | |
- uses: actions/checkout@main | |
- uses: conda-incubator/setup-miniconda@v3 | |
name: Setup conda environment | |
with: | |
auto-update-conda: true | |
python-version: ${{ matrix.python-version }} | |
activate-environment: paste | |
environment-file: environment.yml | |
- name: Install package | |
# Note: editable install for the coverage step to pick up source | |
# correctly. (coverage run --source=src/paste3 -m pytest) | |
run: pip install -e . --no-deps | |
- name: Pre-commit checks | |
run: pre-commit run --all-files | |
- name: List dependencies | |
run: pip freeze | |
- name: Pytest | |
if: matrix.os != 'ubuntu-latest' | |
run: pytest -n auto | |
- name: Pytest with coverage | |
if: matrix.os == 'ubuntu-latest' | |
# Note: Use of pytest -n .. (pytest-xdist) does not work with coverage | |
run: coverage run --source=src/paste3 -m pytest | |
- name: Upload coverage to Coveralls | |
if: matrix.os == 'ubuntu-latest' | |
run: coveralls | |
env: | |
GITHUB_TOKEN: ${{ secrets.COVERALLS_REPO_TOKEN }} |