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description: "A knowledgebase for RNA-Seq experiments and analyses"
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## Home {.unnumbered}

#### [Bulk RNA-seq](chapters/bulk/index.html)  
Gene expression from bulk tissue material.

#### [Single-cell RNA-seq](chapters/sc/index.html)  
Gene expression from single cells. 10X chromium, Smart-seq etc.

#### [AIRR-Seq](chapters/airr/index.html)  
AIRR-Seq, Rep-Seq, Repertoire, VDJ and immune profiling.

#### [Spatial RNA-seq](chapters/spatial/index.html)
Gene expression with spatial information. 10X Visium etc.

#### [ATAC-Seq](chapters/atacseq/index.html)  
Genome wide chromatin accessibility.

#### [Meta transcriptomics](chapters/spatial/index.html)  
Gene expression from multiple/mixed populations or species.

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