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Miniprot p2 #34

Merged
merged 12 commits into from
Dec 1, 2022
Merged

Miniprot p2 #34

merged 12 commits into from
Dec 1, 2022

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DLBPointon
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Updating master to include the new genealignment subworkflows

	modified:   modules/local/chunkfasta.nf
	new file:   modules/local/concat_gff.nf
	modified:   modules/local/csv_generator.nf
	modified:   modules/local/filter_blast.nf
	modified:   modules/local/generate_genome_file.nf
	modified:   modules/local/get_synteny_genomes.nf
	new file:   modules/local/merge_bam.nf
	new file:   modules/local/minimap_samtools.nf
	new file:   modules/nf-core/modules/nf-core/bedtools/sort/main.nf
	new file:   modules/nf-core/modules/nf-core/bedtools/sort/meta.yml
	new file:   modules/nf-core/modules/nf-core/samtools/merge/main.nf
	new file:   modules/nf-core/modules/nf-core/samtools/merge/meta.yml
	new file:   modules/nf-core/modules/nf-core/tabix/bgziptabix/main.nf
	new file:   modules/nf-core/modules/nf-core/tabix/bgziptabix/meta.yml
	new file:   modules/sanger-tol/nf-core-modules/bedtools/bamtobed/main.nf
	new file:   modules/sanger-tol/nf-core-modules/bedtools/bamtobed/meta.yml
	new file:   modules/sanger-tol/nf-core-modules/miniprot/align/main.nf
	new file:   modules/sanger-tol/nf-core-modules/miniprot/align/meta.yml
	new file:   modules/sanger-tol/nf-core-modules/miniprot/index/main.nf
	new file:   modules/sanger-tol/nf-core-modules/miniprot/index/meta.yml
@DLBPointon DLBPointon merged commit 2d04832 into master Dec 1, 2022
@DLBPointon DLBPointon deleted the miniprot-p2 branch December 2, 2022 11:09
DLBPointon added a commit that referenced this pull request Sep 7, 2023
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