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Removes info specific to NGSQ
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GeertvanGeest authored Sep 14, 2022
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### Some good practices for reproducibility

During today and tomorrow we will work with a small *E. coli* dataset to practice quality control, alignment and alignment filtering. You can consider this as a small project. During the exercise you will be guided to adhere to the following basic principles for reproducibility:
During the exercise you will be guided to adhere to the following basic principles for reproducibility:

1. **Execute the commands from a script** in order to be able to trace back your steps
2. **Number scripts** based on their order of execution (e.g. `01_download_reads.sh`)
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├── C15_evaluate_concordance.sh
├── C16_extract_mother_before_filtering.sh
└── C17_evaluate_concordance_before_filtering.sh
```
```

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