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Updating Dockerfile to include bash to support WDL workflows. #27

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Jan 18, 2023
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Updating Dockerfile to include bash to support WDL workflows. #27

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7 changes: 7 additions & 0 deletions Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -33,6 +33,13 @@ RUN apk add --no-cache perl-doc
# required for perl "use diagnostics", used by SampleName.pm
RUN apk add --no-cache db-dev
RUN apk add --no-cache expat-dev
# required for dependencies of BioPerl
RUN apk add --no-cache openssl
RUN apk add --no-cache openssl-dev
RUN apk add --no-cache zlib
RUN apk add --no-cache zlib-dev
# required for WDL workflows to use RNApeg
RUN apk add --no-cache bash

# Install perl modules
RUN cpan App:cpanminus
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