Skip to content

Releases: svalkiers/clusTCR

1.0.3

28 Mar 15:09
Compare
Choose a tag to compare

[Chain specification and bugfixing]

  • The Clustering object now contains a new argument to specify the chain ('A' or 'B'). The addition of this argument does not influence the clustering process, but the chain information will be used during downstream cluster analysis (particularly for the Pgen calculation within the compute_features() function)
  • A bug was fixed that caused pre-clusters without any HD = 1 edges to end up among the final clustering results.

1.0.2

03 Aug 09:00
Compare
Choose a tag to compare

[AIRR standards & additional V gene functionalities]

  • ClusTCR now adopts the AIRR rearrangement nomenclature ("junction_aa" & "v_call")
  • The ClusteringResult object now contains a new property "edges" (network edges of the clusters)
  • Edges can now be calculated including the V gene (previously only CDR3)