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  1. SyntenyFinder SyntenyFinder Public

    SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-level genome assemblies from NCBI and offers customization opti…

    Jupyter Notebook 28 7

  2. RearrangementIndexer RearrangementIndexer Public

    Quantify ancestral linkage group rearrangement in chromosome-level genomes

    Python 2

  3. genome_metadata genome_metadata Public

    Genome Metadata Visualizer is a series of scripts written to process and visualise genome metadata after it is pulled from NCBI using the dataset and dataformat command line tools.

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  4. lingula_genome lingula_genome Public

    R script that was used to generate figures for our Lingula anatina genome paper

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  5. SyntenyFinderCLI SyntenyFinderCLI Public

  6. SyntenyFinder2 SyntenyFinder2 Public