Notes

[williamhbartlett]

I need realistic patient notes for my project. While some notes exist in the data (I'm using Coherent), I have found that they are mostly rudimentary restructurings of information contained in the structured data. Is there any way to use this dataset or software to access / generate richer, realistic notes, or is that out of scope?

Thanks.

[eedrummer]

A starting point can be: https://github.com/synthetichealth/chatty-notes

This is a set of python scripts that take the Synthea FHIR Bundles, pull some of the information and send it to the ChatGPT API to generate more narrative clinical notes.

Some caveats:

• This was my first generative AI work. It uses a "one shot" prompt and is not the way I would do things now, but the code could still be a useful place to start and/or may be good enough for your purposes as-is.
• It was tested on the ChatGPT 3.5 API. I don't think API access existed to 4.0 at the time. API access code may be totally out of date.
• The code has special cases for osteoarthritis as that was the focus of the work I was doing.

[williamhbartlett]

That's awesome! Where's the prompt? I don't see it... This could be very useful.

…

On Mon, Feb 3, 2025 at 3:39 PM Andy Gregorowicz ***@***.***> wrote: A starting point can be: https://github.com/synthetichealth/chatty-notes This is a set of python scripts that take the Synthea FHIR Bundles, pull some of the information and send it to the ChatGPT API to generate more narrative clinical notes. Some caveats: - This was my first generative AI work. It uses a "one shot" prompt and is not the way I would do things now, but the code could still be a useful place to start and/or may be good enough for your purposes as-is. - It was tested on the ChatGPT 3.5 API. I don't think API access existed to 4.0 at the time. API access code may be totally out of date. - The code has special cases for osteoarthritis as that was the focus of the work I was doing. — Reply to this email directly, view it on GitHub <#1556 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/BMFJMRD74JAZIRRSAASLIQT2N7HYLAVCNFSM6AAAAABWM6TOPOVHI2DSMVQWIX3LMV43URDJONRXK43TNFXW4Q3PNVWWK3TUHMYTEMBUG4ZTQMA> . You are receiving this because you authored the thread.Message ID: ***@***.*** com>

-- Will Bartlett, MS, MBA 646 335-2836 | Calendly <https://calendly.com/will-h-bartlett>

[eedrummer]

Prompts are in the templates directory: https://github.com/synthetichealth/chatty-notes/tree/main/templates

They are Jinja templates.

If you look at chatty.py lines 179 - 193, you'll see how it looks at the FHIR data to select a particular template.