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1. cuteSV cuteSV Public

   Long read based human genomic structural variation detection with cuteSV

   Python 248 36

2. cuteFC cuteFC Public

   Forked from Meltpinkg/cuteFC

   Regenotyping structural variants through an accurate and efficient force-calling method

   Python

3. sv-benchmark sv-benchmark Public

   Forked from PacificBiosciences/sv-benchmark

   Public Benchmark of Long-Read Structural Variant Caller on ONT PromethION Data

   11 5

4. rMETL rMETL Public

   rMETL - realignment-based Mobile Element insertion detection Tool for Long read

   Python 16 4

5. rCANID rCANID Public

   read Clustering and Assembliy-based Novel insertion Detection tool

   Python 5 2

6. rMFilter rMFilter Public

   Acceleration of long read-based structure variation calling by chimeric read filtering

   C++ 7 2