admixtools

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Interactive visualization of population genetics data for ~10,000 modern and ancient individuals.

python heroku bioinformatics pca-analysis bokeh population-genetics umap bokeh-server admixtools plink2

Python script to generate .snp and .ind Eigenstrat files from a PHYLIP infile

snps rad population-genomics population-genetics admixture hybridization phylip pyrad admixtools eigenstrat ddrad introgression f-statistics d-statistic rad-sequencing ddrad-sequencing geno ind

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