Unix, R and python tools for genomics and data science
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Dec 19, 2024 - Shell
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cancer-genomics
Here are 7 public repositories matching this topic...
Bioinformatics on GCP, AWS or Azure
aws bioinformatics azure gcp gatk variants cancer-genomics genome-sequencing genome-analysis variant-calls genomics-analysis
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Jun 23, 2024 - Shell
A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)
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Aug 30, 2019 - Shell
Set of commandline tools for analysis of tumor variants without a matching normal. Method described in Genome Research: http://genome.cshlp.org/content/25/9/1382.full
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May 10, 2022 - Shell
Docker container to download dbNSFP 'database' and wrangle it into a format suitable for pipeline annotation process
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Aug 28, 2019 - Shell
Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.
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Dec 4, 2019 - Shell
Downloading and processing pipelines used for single cell gene expression assays of human tumor biopsies
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Jan 25, 2018 - Shell
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