mimic4fhir converts data from MIMIC IV database (PostgreSQL) to HL7 FHIR R4 resources or the German Medical Informatics Initiative core data sets.
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Jul 1, 2022 - Java
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medical-informatics-initiative
Here are 4 public repositories matching this topic...
cBioPortal is a data visualization tool for cancer genomics. This repository contains all components to deploy the customized version of cBioPortal used in the PM4Onco use case of the Medical Informatics Initiative Germany.
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Dec 14, 2024 - Shell
MIRACUM-Pipe is a whole exome and panel sequencing pipeline for precision oncology (https://github.com/AG-Boerries/MIRACUM-Pipe). This repository is a port of the pipeline running inside a singularity container.
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Oct 24, 2023 - R
Python script to transform OPS data into FHIR format.
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Aug 21, 2020 - Python
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