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metagenomic-analysis

Here are 5 public repositories matching this topic...

pfeiferd / genestrip

Genestrip - Efficient read classification, filtering and k-mer counting for selected groups of species

java bioinformatics high-performance command-line-tool genomes metagenomic-analysis metagenomic-classification genomic-data-analysis kmer-counting pathogen-genomics kraken2 krakenuniq

Updated Jan 21, 2025
Java

MGX-metagenomics / MGX-gui

MGX graphical user interface

metagenomics metagenomic-analysis

Updated May 30, 2024
Java

Sequedex / Sequedex-build

Files needed to build and run Sequedex V2.

genome-analysis bioinformatics-analysis metagenomic-analysis

Updated Mar 26, 2019
Java

lanl / sequedex-core

For more information see https://sequedex.lanl.gov

genome-analysis bioinformatics-analysis metagenomic-analysis

Updated Mar 26, 2019
Java

LaboratorioBioinformatica / MAGset

MAGset is a tool to analyze and compare MAGs of known species

mag metagenomics genome-annotation genomes genome-analysis genome-assembly metagenomic-analysis metagenomic-pipeline

Updated Jul 10, 2024
Java

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