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ncbi-genbank

Here are 5 public repositories matching this topic...

dewshr / NCBI-GenBank-file-parser

This program can be used to parse the NCBI GenBank file to create a tabulated csv file.

python metadata parser extract-information biopython ncbi-genbank extract-data file-parser reference-data

Updated Mar 4, 2019
Python

enviro-lab / ncbi-submit

A tool to prepare files and run/monitor programmatic submissions to NCBI

ftp upload ncbi-genbank ncbi submission ncbi-sra ncbi-biosamples

Updated Mar 5, 2024
Python

michalbukowski / fetch-genomes

Download genomes from NCBI GenBank FTP site

genbank ncbi-taxonomy ncbi-genbank genomes genome-assemblies

Updated Oct 25, 2023
Python

NataliaKudr / IGV

Python and R Scripts for Statistical analysis of available immunogobulin variable genes

python human python3 sequence ncbi-genbank dna-sequences immunoglobulin ncbi-database ncbi-blast primates dna-assembly primatedata

Updated Sep 4, 2018
Python

NCBI-Hackathons / Annotation_Checker

This pipeline will check assembly and annotations based on gene families.

ncbi-genbank ncbi genome-assembly alpha-release

Updated Nov 30, 2017
Python

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