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shotgunmetagenomicsequencing

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oliverdesa / Clustering_Metagenomics

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This directory contains many scripts delving into the downstream analysis of shotgun metagenomic sequencing data from colorectal cancer patient, ICI patients and some IBD patients. This directory is not finished or meant to be copied and used by others. simply to provide examples of code currently being written and worked on.

visualization python shell machine-learning bioinformatics rna-seq r microbiota maaslin2 shotgunmetagenomicsequencing
  • Updated Nov 1, 2024
  • Jupyter Notebook

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