Raspir, the rare species identifier
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Oct 19, 2023 - Python
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species-identification
Here are 14 public repositories matching this topic...
Fungal Validation and Identification Pipeline
taxonomy fungi species-delimitation phylogenetic-tree species-identification multigene sequence-validation
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Feb 7, 2025 - Python
MitoSIS (Mitochondrial Species Identification System) is a wrapper for mitochondrial genome assembly and identification of sample contamination or mislabeling.
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Oct 12, 2021 - Python
This repository contains code for preprocessing, training, evaluation, and inferencing of two models, SSD and Faster R-CNN, for the task of bird detection and classification. For details about the Flask web application built on this model visit the link below.
python machine-learning computer-vision deep-learning birds ssd faster-rcnn tensorboard object-detection preprocessing classification-model species-identification tensorflow2
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Jul 5, 2023 - Python
Image classification pipeline for natural sciences
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Jan 29, 2025 - Python
A Flask web application for the classification of bird species built using TFServing, Docker and MySQL.
mysql python docker flask computer-vision deep-learning tensorflow birds conservation classification faster-rcnn object-detection tfserving species-identification
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Jul 5, 2023 - Python
Running inference on images to detect the species of animals and plants with the Microsoft AI for Earth Species Recognition Model
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May 30, 2022 - Python
DNA barcoding analysis pipeline
bioinformatics genomics dna phylogenetics genbank fasta dna-sequences phylogeny bioinformatics-analysis blastn sanger-chromatograms ab1 dna-barcode dna-barcoding species-identification dna-alignment genbank-files mega11
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Jul 20, 2023 - Python
Parser of BLAST results
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Aug 5, 2023 - Python
Running inference on images to detect the species of animals and plants with a image-recognition model trained on the iNaturalist 2021 Competition
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May 30, 2022 - Python
A snakemake pipeline for tick determination from ONT whole genome sequencing samples.
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Jun 13, 2023 - Python
Streamline your ecoacoustic analysis with LEAVES, offering advanced tools for large-scale soundscape annotation and visualization. Join researchers and citizen scientists using LEAVES to analyze complex soundscapes faster and more accurately.
machine-learning annotation waveform python3 dimensionality-reduction soundscapes decision-support kmeans-clustering annotation-tool acoustics dbscan-clustering leaves ecoacoustics species-identification python-dash mel-frequency-cepstral-coefficients spectrograms soundscape-ecology
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Dec 4, 2024 - Python
Species identification model for Japanese dragonflies and damselflies
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May 17, 2024 - Python
Image-based plant identification at global scale.
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Oct 19, 2023 - Python
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