v0.1.1

patch update

v0.1.0 - initial release

This release just covers a port of align_trim from the artic pipeline.

Main differences:

• optionally filter segments by mapping quality
• perform both softmasks in single BAM iteration (results in multiple BAM outputs)
  during primer search, in the case that a given position is equidistant between two primer sites the upper bound is now used instead of the lower when locating the primer start sites (this typically ends up with more correctly paired primers)
• output more stats at the end of the report file