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@x-atlas-consortia

Atlas Consortia

A place for consortia who produce biologic data organized into atlases to share software resources.

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  1. ubkg-neo4j ubkg-neo4j Public

    A container implementation to serve the Unified Biomedical Knowledge Graph in Neo4j

    Shell 1

  2. ubkg-etl ubkg-etl Public

    A framework that combines data from the UMLS with assertions from other data sources into a set of CSV files that can be imported into neo4j to build a Unified Biomedical Knowledge Graph (UBKG)

    Python 4

  3. data-ingest-board data-ingest-board Public

    The UI App for HuBMAP and Sennet Data Publishing Dashboard

    JavaScript 1

  4. hra-api hra-api Public

    HRA-API: Human Reference Atlas API

    Jupyter Notebook

  5. hra-pop hra-pop Public

    HRApop

    JavaScript 1

  6. hs-ontology-api hs-ontology-api Public

    Ontology API built on top of the UBKG API and shared by HuBMAP and SenNet projects

    Python 1

Repositories

Showing 10 of 32 repositories
  • ubkg-etl Public

    A framework that combines data from the UMLS with assertions from other data sources into a set of CSV files that can be imported into neo4j to build a Unified Biomedical Knowledge Graph (UBKG)

    x-atlas-consortia/ubkg-etl’s past year of commit activity
    Python 4 MIT 0 7 0 Updated Jan 27, 2025
  • SimpleKnowledge Public

    The SimpleKnowledge property graph editor

    x-atlas-consortia/SimpleKnowledge’s past year of commit activity
    0 CC0-1.0 0 0 0 Updated Jan 27, 2025
  • hra-dashboard-data Public

    Gathers data for the HRA Dashboard

    x-atlas-consortia/hra-dashboard-data’s past year of commit activity
    HTML 1 MIT 1 1 0 Updated Jan 24, 2025
  • data-distillery-api Public

    the Data Distillery API

    x-atlas-consortia/data-distillery-api’s past year of commit activity
    Shell 0 0 1 1 Updated Jan 24, 2025
  • hra-pop Public

    HRApop

    x-atlas-consortia/hra-pop’s past year of commit activity
    JavaScript 0 MIT 1 45 1 Updated Jan 24, 2025
  • data-submission-guide Public

    A documentation site for the Data Submission Guide used by both HuBMAP and SenNet

    x-atlas-consortia/data-submission-guide’s past year of commit activity
    1 0 3 1 Updated Jan 23, 2025
  • dev-assay-class-api Public

    A small development RESTful server exposing /assayclasses and /assayclasses/<assay-code>

    x-atlas-consortia/dev-assay-class-api’s past year of commit activity
    Python 0 MIT 0 0 1 Updated Jan 22, 2025
  • hs-ontology-api Public

    Ontology API built on top of the UBKG API and shared by HuBMAP and SenNet projects

    x-atlas-consortia/hs-ontology-api’s past year of commit activity
    Python 1 0 5 1 Updated Jan 22, 2025
  • hra-api Public

    HRA-API: Human Reference Atlas API

    x-atlas-consortia/hra-api’s past year of commit activity
    Jupyter Notebook 0 MIT 0 5 0 Updated Jan 16, 2025
  • data-ingest-board Public

    The UI App for HuBMAP and Sennet Data Publishing Dashboard

    x-atlas-consortia/data-ingest-board’s past year of commit activity
    JavaScript 1 MIT 0 21 1 Updated Jan 16, 2025
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