ci: change conda path

zavolanlab · Jan 19, 2025 · c68e8af · c68e8af
1 parent d95d4de
commit c68e8af
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml
@@ -31,7 +31,7 @@ jobs:
           auto-activate-base: false
 
       - name: Update mirflowz env with dev packages
-        run: mamba env update -p $CONDA_PREFIX -n mirflowz -f environment.dev.yml
+        run: mamba env update -p $MAMBA_ROOT_PREFIX -n mirflowz -f environment.dev.yml
 
       - name: display environment info
         run: |
@@ -76,7 +76,7 @@ jobs:
           auto-activate-base: false
 
       - name: update mirflowz env with dev packages
-        run: mamba env update -p $CONDA_PREFIX -n mirflowz -f environment.dev.yml
+        run: mamba env update -p $MAMBA_ROOT_PREFIX -n mirflowz -f environment.dev.yml
 
       - name: display environment info
         run: |
@@ -115,7 +115,7 @@ jobs:
           auto-activate-base: false
 
       - name: update mirflowz env with root packages
-        run: mamba env update -p $CONDA_PREFIX -n mirflowz -f environment.root.yml
+        run: mamba env update -p $MAMBA_ROOT_PREFIX -n mirflowz -f environment.root.yml
 
       - name: display environment info
         run: |
@@ -151,7 +151,7 @@ jobs:
           auto-activate-base: false
 
       - name: update mirflowz env with dev packages
-        run: mamba env update -p $CONDA_PREFIX -n mirflowz -f environment.dev.yml
+        run: mamba env update -p $MAMBA_ROOT_PREFIX -n mirflowz -f environment.dev.yml
 
       - name: display environment info
         run: |