SNPRelate cannot find variant.id from SeqArray object

[yanglipmed]

In SeqArray object, this is variant.id. When SNPRelate::snpgdsSummary( ) opens SeqArray object, it gives error: Error in index.gdsn(gds, "snp.id") : No such GDS node "snp.id"!.

How to link snp.id to variant.id in SNPRelate?

[zhengxwen]

Please use seqSummary() in the SeqArray package instead.

[yanglipmed]

Thanks.