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43 Open 60 Closed
43 Open 60 Closed
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Issues list

Does snpgdsLDprunning support multithreading?
#110 opened Nov 6, 2024 by wolass
1
Error in .InitFile2
#108 opened May 13, 2024 by Tom159357
1
Error: There is no SNP!
#107 opened Mar 22, 2024 by jane-edgeloe
agglomerative method in snpgdsHCluster
#106 opened Jan 11, 2024 by botanicpanic1
Function for matrix-vector multiplication
#105 opened Dec 6, 2023 by JianqiaoWang
SNP weights
#104 opened Nov 16, 2023 by Tannervanorden
Adding a new GDS node to my existing GDS file
#103 opened Nov 8, 2023 by GabryS3
snpgdsLDpruning gives an empty snp dataset
#102 opened Nov 6, 2023 by GabryS3
4
Error during installation 3.13.2023
#100 opened Mar 13, 2023 by bechee
A suggestion feature required
#99 opened Jan 18, 2023 by Glaucidium
@zhengxwen
1
Trouble converting GDS2BED
#98 opened Dec 2, 2022 by clorenzo1
Error when converting vcf to gds
#96 opened Aug 23, 2022 by AmanahLW
2
Error in snpgdsVCF2GDS......Genotype code is out of range
#95 opened Jul 4, 2022 by gaochengPRC
SNPRelate for organelle genome (mitochondria or chloroplast)
#93 opened Mar 15, 2022 by ucabuk
2
snpgdsLDpruning for getting the number of independent markers for GWAS
#90 opened Jan 17, 2022 by MuBulut
2
PC-AIR issue when over 50k samples.
#86 opened Apr 29, 2021 by jjfarrell
11
Combining GDS files
#85 opened Mar 30, 2021 by bio-bench
Population Assignments for PCA plots
#80 opened Feb 5, 2021 by carlahurt
1
SNPRelate for parasite genome analysis
#78 opened Jan 18, 2021 by vappiah
1
snpgdsCombineGeno makes new snp.id when combine multiple gds files
#77 opened Dec 23, 2020 by yanglipmed
2
SNPRelate cannot find variant.id from SeqArray object
#76 opened Dec 17, 2020 by yanglipmed
2
How can I modify the y axis (individual dissimilarity)
#75 opened Oct 22, 2020 by Carol-Symbiomics
I was using vcfMissingness.pl to generate pairwise missingness matrices but after the process went through it says "Fatal error: cannot open file 'resources/missingnessHeatMaps.R': No such file or directory" even if the directory is there. Any input will be appreciated.
#74 opened Oct 21, 2020 by mergi-2674
Weighted Fst meaning
#72 opened Sep 22, 2020 by NamLQ
family information in snpgdsGDS2PED
#70 opened Sep 2, 2020 by treebreeder
2
ProTip! What’s not been updated in a month: updated:<2024-11-26.