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MIMIC Code v2.1.0

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@alistairewj alistairewj released this 15 Dec 02:16
· 604 commits to main since this release
3e951e1

This release fixes blood gas and (postgres) vent/oxygen delivery queries, adds the ntprobnp column to the cardiac_marker concept, and improves aux scripts for generating concepts in MIMIC-III.

Change log:

  • Allow extra options to be passed to psql calls with MIMIC-III by @juliangilbey in #1195
  • A single table aggregating vasoactive agents is now available as vasoactive_agent, see #1203
  • Include BNP in cardiac markers concept by @pedrogemal in #1204
  • Fixed first day blood gas queries to use the specimen data present in labevents rather than a no-longer existing probabilistic prediction of speciment, #1209
  • Same PR as above, propagated previous vent/oxygen delivery changes to the postgres scripts and improved tests #1209

Full Changelog: v2.0.0...v2.1.0