Fix portability issue in parse_macros function used by the MPAS registry #1229
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The parse_macros function that is used by the MPAS registry 'parse' tool previously made use of the state/saveptr/lasts argument to strtok_r when parsing command-line macro definitions. This was not portable and resulted in incorrectly generated output on some systems. This commit reworks the parse_macros function so that it no longer uses the state/saveptr/lasts argument to strtok_r and instead relies only on the return value of strtok_r to provide portability across systems with different strtok_r implementations.
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This merge addresses several issues in the MPAS-Atmosphere model and in the MPAS infrastructure. Specific changes in this merge include: * Fix to a portability issue in the MPAS registry 'parse' tool, which caused files in the src/core_<CORE>/inc directory to not be generated correctly at build time on some systems (PR #1229). * Addition of two fields, brtemp and cldmask, that are needed by MPAS-JEDI. Although not needed by stand-alone MPAS-Atmosphere, these fields are associated with the 'jedi_da' package and therefore have no effect when MPAS-Atmosphere is run without setting config_jedi_da = true (PR #1232). * Removal of a redundant query of the nCellsSolve dimension in the physics_run_init routine. The extra query had no impact on results, and its removal can be considered clean-up (PR #1236).
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This PR fixes a portability issue in the
parse_macrosfunction used by the MPAS registry.The
parse_macrosfunction that is used by the MPAS registryparsetool previously made use of the state/saveptr/lasts argument tostrtok_rwhen parsing command-line macro definitions. This was not portable and resulted in incorrectly generated output on some systems.This PR reworks the
parse_macrosfunction so that it no longer uses the state/saveptr/lasts argument tostrtok_rand instead relies only on the return value ofstrtok_rto provide portability across systems with differentstrtok_rimplementations.