NSG_mouse_metagenomics

This repo contains data regarding analysis of a diarrhea outbreak among NSG mice at Stanford University.

Name	Name	Last commit message	Last commit date
Latest commit brymerr921 Update README.md Aug 29, 2022 024abc8 · Aug 29, 2022 History 4 Commits
220801_mouse_diarrhea_reproducible_files/figure-gfm	220801_mouse_diarrhea_reproducible_files/figure-gfm	Large update including github markdown	Aug 29, 2022
data	data	Initial commit, not including 246 genome bins for now	Aug 17, 2022
figures	figures	Large update including github markdown	Aug 29, 2022
tables	tables	Large update including github markdown	Aug 29, 2022
220801_mouse_diarrhea_reproducible.Rmd	220801_mouse_diarrhea_reproducible.Rmd	Large update including github markdown	Aug 29, 2022
220801_mouse_diarrhea_reproducible.md	220801_mouse_diarrhea_reproducible.md	Large update including github markdown	Aug 29, 2022
NSG_diarrhea_manuscript.docx	NSG_diarrhea_manuscript.docx	Initial commit, not including 246 genome bins for now	Aug 17, 2022
README.md	README.md	Update README.md	Aug 29, 2022
Supplementary Tables.xlsx	Supplementary Tables.xlsx	Initial commit, not including 246 genome bins for now	Aug 17, 2022
c_cuniculi_enterotoxin_gene.fasta	c_cuniculi_enterotoxin_gene.fasta	Initial commit, not including 246 genome bins for now	Aug 17, 2022
mouse_diarrhea_phyloseq_coverage.rds	mouse_diarrhea_phyloseq_coverage.rds	Initial commit, not including 246 genome bins for now	Aug 17, 2022

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