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Conflicts:
	biomtotxt.sh

some kind of merge
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alk224 committed Feb 1, 2016
2 parents 48e9b5a + a9e794e commit 3312c8d
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6 changes: 6 additions & 0 deletions biomtotxt.sh
Original file line number Diff line number Diff line change
Expand Up @@ -113,7 +113,13 @@ try again.

biom convert -i $1 -o $biomdir/$biomname.txt --header-key taxonomy --to-tsv --table-type="OTU table" 2>/dev/null
wait
<<<<<<< HEAD
sed -i '/# Constructed from biom file/d' $biomdir/$biomname.txt
=======

## Remove annoying line placed by biom conversion
sed -i '/# Constructed from biom file/d' $biomdir/$biomname.txt
>>>>>>> a9e794e3d9e7b650b8017d103f967942ac22f55b

if [[ -s $biomdir/$biomname.txt ]]; then
echo "
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