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Releases: eweitz/ideogram

v1.42.0

19 Apr 02:53
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  • Find gene by synonym (#343)
  • Fix splice bug when 1st UTR and exon exactly align (#337)
  • Delete old service worker caches, economize NPM package (#342)
  • Refine synonym display, handle rare splicing, refine protein colors (#345)

v1.41.0

17 Jan 13:59
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  • Enable protein diagrams (#334)
  • Colored protein diagrams (#335)
  • Add minimal example code for gene leads kit (#336)
  • Update Jupyter example to fix deprecations (#332)
  • Fix rotate-on-click for chromosomes fetched from NCBI (#331)

Here's a video on gene leads ideogram. (Unmute it by clicking the speaker icon at lower right.)

Gene_leads_ideogram__IdeogramJS_2023-01-16.mp4

v1.40.0

07 Dec 13:56
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  • Fix sparse genes in gene leads (#328)
  • Fix splice animation for unannotated 5'-UTR in nonsense mediated decay (#327)
  • Rebrand "Related genes" to "Gene leads", refine example code (#326)

v1.39.0

20 Nov 17:59
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  • Add UI to select any alternative transcript (#324)
  • Refine object constancy, handling of unfound genes, subpart hover text (#323)
  • Fix CDS size when on same exon as 3'-UTR (#322)
  • Compress all human gene structures into size of smartphone photo (#321)

v1.38.0

21 Oct 00:26
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  • Animate splicing gene transcripts (#320)
  • Highlight, navigate, and summarize transcript subparts (#318)
  • Enable splicing gene transcripts (#313)
  • Enrich TSV parser, related genes configurability (#312)
  • Improve offline handling in related genes kit (#311)
  • Show gene structure diagrams in tooltips (#309)
  • Fix issue with custom organism cytogenetic band files (#308)

v1.37.0

29 Jun 12:49
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This improves the related genes kit:

  • Show paralog neighborhoods (#303)
  • 70% smaller cache, with all paralogs; 20% faster related genes start time (#302)

v1.36.0

13 Apr 11:58
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This improves the related genes kit:

  • Instantly fetch interactions for human and mouse (#301)

v1.35.0

12 Apr 11:58
31c0d8c
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This improves the related genes kit:

  • Instantly find interacting genes (#295)
  • Instant gene description (#299)
  • Instantly fetch paralogs (#300)
  • Smooth exploration: hide tooltip after clicking annotation (#298)
  • Refine annotation labels: better algorithms for sorting and overlap (#296)
  • Prototype: enable related genes kit to show all genes in pathway (#297)

v1.34.0

15 Feb 13:26
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This improves the related genes kit:

  • Refine interaction detail, fix misdirected group interactions, test (#292)
  • Summarize interactions by direction (#293)
  • Instantly summarize interaction direction (#294)

v1.33.0

05 Jan 13:57
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This refines the related genes kit:

  • Report more detailed pathway interactions (#289)
  • Reduce label noise, omit accessions, fix search bug in Gene Hints (#290)
  • Fix duplicative description for paralogs (#291)