v1.50.0

• Simplify configuration for Gene Leads (#377)

v1.49.0

Updates:

• Enable searching genes by Ensembl ID (#376)
• Avoid hiding tooltip on first hover of previous clicked annotation (#375)

Here's a video on Gene Leads Ideogram. Unmute it by clicking the speaker icon at lower right. Compare to the equivalent video from 2 years ago, and notice major improvements like:

• Distribution curves for gene expression by tissue
• Better molecular diagrams for proteins
• Pathway diagrams

Gene_leads_ideogram_2024.mov

v1.48.0

• Show more relevant interacting genes (#374)

v1.47.0

• Add observable event for draw completion in pathway diagrams (#371)

v1.46.0

This enables biochemical pathway diagrams for interacting genes, giving deep functional insight into cell circuits.

Pathway_diagrams__Ideogram_2024-08-09.mov

Try it out yourself! See #370 for details.

v1.45.1

• Fix URL code for tissue cache range fetch (#368)

v1.45.0

This release integrates gene-tissue expression visualizations into Ideogram. Data comes from GTEx. Here's how it looks!

Release_1-45-0__IdeogramJS_2024-01-15.mov

Links below -- particularly #365, #366, and #367 -- describe the enhancements in detail.

Changes

• Ensure top max-expressing tissue is shown, robustify curve shift (#367)
• Reframe tissue curves on hover, enriching expression comparison (#366)
• Show gene expression distribution by tissue (#365)
• Enhance gene leads tooltip: plot reference expression by tissue (#364)
• Show top expressed tissues by gene (#363)
• Show if gene is among top expressed in tissue (#362)

v1.44.1

• Fix Gene Leads slowness for pig (#361)

v1.44.0

• Improve accessibility, fix annotsInList parameter (#360)

v1.43.0

• Enable interactive legend (#359)
• Improve transcript navigation, close popover on "Escape" (#358)
• Update to Ensembl 110 and GRCm39; refine protein colors (#357)
• Show signal peptides in protein diagrams (#356)
• Protein diagrams: show unfeatured regions, enlarge (#355)
• Illustrate membrane proteins (#353, #354)
• Clarify sequence features in protein diagrams (#352)
• Add mouse RNA and protein diagrams, update human protein diagrams (#351)
• Refine paralog neighborhoods (#350)
• Refine tooltips for splice toggle and isoform arrows (#349)
• Coarsen fruit fly chromosomes to fix cytoband issues (#348)
• Add Poplar assembly (#346)