-
Notifications
You must be signed in to change notification settings - Fork 13
New issue
Have a question about this project? # for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “#”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? # to your account
[ENH]: Add support for on-the-fly template space transformation #299
Merged
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## main #299 +/- ##
============================================
+ Coverage 88.15% 100.00% +11.84%
============================================
Files 111 1 -110
Lines 4820 1 -4819
Branches 957 0 -957
============================================
- Hits 4249 1 -4248
+ Misses 417 0 -417
+ Partials 154 0 -154
Flags with carried forward coverage won't be shown. Click here to find out more. |
Needs to go after #298 |
fraimondo
previously approved these changes
Feb 14, 2024
51c0d78
to
c11a7b3
Compare
|
1745d0f
to
2465877
Compare
aa60ee7
to
3089a7a
Compare
1720b57
to
5211abf
Compare
fce0120
to
2b4e463
Compare
@fraimondo Can we merge this? |
fraimondo
reviewed
Mar 27, 2024
@synchon Just that one question. |
293137b
to
e8f8ede
Compare
…ing via templateflow
a6723d1
to
78d63d6
Compare
# for free
to join this conversation on GitHub.
Already have an account?
# to comment
Labels
enhancement
New feature or request
mask
Issues or pull requests related to masks
parcellation
Issues or pull requests related to parcellations (atlases)
template-space
Issues or pull requests related to template spaces
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
This PR adds support for on-the-fly template space transformation in
junifer.data.get_parcellation()
andjunifer.data.get_mask()
enabling merging of multi-space parcellation and mask. The target space is set as per the datagrabber's specification and all of the other assets are transformed to it and then applied.