Installation

For Users

Download latest release and execute it. This will start a local server on your machine. Open the browser and navigate to: http://mts-lsp-l06208:8000/

For Developers

1. Checkout Project

git clone https://github.com/labsyspharm/cycif_viewer.git

2. Python environment installation

• Install miniconda or conda.
• Create env: conda env create -f requirements.yml

3. Node.js installation and packages

• Install Node.js, then navigate to /cycif_viewer/client and run npm install to install all packages listed in package.json.
• Run npm run start to package the Javascript, or run npm run watch if you plan on editing dependencies

4. Run Server

• Active environment: conda activate cycif_viewer. Navigate to your project root folder and run your server: python run.py.
• The tool is by default available at http://MTS-LSP-L06208:8000