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33 Open 69 Closed
33 Open 69 Closed
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Issues list

Meaning of * in lineage
#110 opened Dec 20, 2024 by Reilly12
Bug: also pull recombinants in lookupSublineages
#109 opened May 4, 2023 by flaneuse
Register package on bioconductor
#108 opened Apr 14, 2023 by flaneuse
Select certain time period in plotAllLineagesByLocation
#107 opened Mar 30, 2023 by B0HA0
Remove GISAID tag for ggarrange graphs
#106 opened Mar 7, 2023 by mobrien-15
Possible to suppress "Is this a location of interest? (Y/N)" prompts?
#102 opened Feb 28, 2023 by nrminor
5
Problem with authenticateUser()
#100 opened Dec 16, 2022 by josephhughes
1
Is it possible to choose host: wastewater ?
#99 opened Dec 12, 2022 by carlottaolivero
Unable to plot latest data lineage prevalence
#97 opened Nov 4, 2022 by farahishtiaq
Unable to register GISAID credentials
#96 opened Oct 19, 2022 by mecalderon
6
Unable to install library(outbreakinfo)
#95 opened Oct 12, 2022 by carlottaolivero
4
Silent and intergenic mutations
#94 opened Aug 3, 2022 by a-roguet
getAdmn1ByCountry output is not equal to getEpiData
#92 opened Jul 13, 2022 by watronfire
Update the getCuratedLineages function to include recombinant lineages
#89 opened Jun 16, 2022 by flaneuse
I could not use this library
#86 opened Jan 27, 2022 by liumeng595
1
Request: Add info from the summary table on outbreak.info Mutation Reports
#85 opened Jan 26, 2022 by starlagthornhill
1
Could the authenticate user function be updated to accept a username and password
#84 opened Jan 15, 2022 by amishcode
2
Genomics API: more descriptive error message when unable to get prevalence of mutation for location
#82 opened Jan 12, 2022 by EmilyHaag
Genomics API: getPrevalence() does not accept deletions
#81 opened Jan 12, 2022 by EmilyHaag
1
genomics locations: can't get to a particular location
#78 opened Nov 4, 2021 by flaneuse
2
Better error message for bad inputs to getLocationData
#76 opened Nov 3, 2021 by flaneuse
1
Need to check resources fetchAll for list/string inconsistencies
#73 opened Oct 29, 2021 by flaneuse
switch epi json parsing from jsonlite
#72 opened Oct 29, 2021 by flaneuse
@gkarthik
Issues with location lookup in getEpiData
#60 opened Oct 11, 2021 by flaneuse
@gkarthik
Clean up outputs from cumulative getPrevalence calls
#59 opened Oct 11, 2021 by flaneuse
ProTip! What’s not been updated in a month: updated:<2025-01-08.