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41 Open 119 Closed
41 Open 119 Closed
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Issues list

👋 Say hi! Join the community! Let us know what you are using pydna for
#342 opened Jan 27, 2025 by manulera
2
AddGene plasmids for assignment
#335 opened Jan 17, 2025 by manulera
@BjornFJohansson @dgruano
@manulera @hiyama341
4
Gathered info on DNA ligation
#329 opened Dec 2, 2024 by BjornFJohansson
Extended IUPAC alphabet for ds and ss DNA (dsIUPAC) idea New idea
#327 opened Nov 12, 2024 by BjornFJohansson
Check behaviour of spaces when creating Dseq objects from a text representation
#322 opened Oct 30, 2024 by dgruano
2
Creating Dseq with crick strand but without watson nor ovhg returns math domain error
#321 opened Oct 30, 2024 by dgruano
1
Implement Gateway Cloning
#313 opened Oct 15, 2024 by dgruano
6
Cannot pass max_nodes to Assembly
#312 opened Oct 15, 2024 by dgruano
2
Implement USER cloning
#309 opened Oct 14, 2024 by dgruano
5
Branch structure
#302 opened Oct 9, 2024 by manulera
2
Golden Gate: backbones assembling together
#299 opened Oct 8, 2024 by manulera
2
Make reference to Bioconda/pydna
#286 opened Oct 6, 2024 by BjornFJohansson
2
[CRISPR module] Support IUPAC notation in PAMs
#280 opened Oct 3, 2024 by dgruano
3
Basic implementation of ViennaRNA for prediction of primer dimers and secondary structure
#268 opened Sep 24, 2024 by dgruano
2
Predict synonimous mutations
#267 opened Sep 23, 2024 by dgruano
1
Return error if argument overlap is too high in assembly_fragments Hackathon-2024
#265 opened Sep 20, 2024 by manulera
@manulera
5
Improve cas9 documentation documentation Hackathon-2024
#259 opened Sep 5, 2024 by manulera
@hiyama341
6
Unintended behaviour in dseq.__init__?
#253 opened Aug 12, 2024 by manulera
2
Reproducing the NEB Tm calculator behavior in pydna Hackathon-2024
#237 opened Jun 25, 2024 by BjornFJohansson
28
SeqFold enhancement
#229 opened May 15, 2024 by BjornFJohansson
SeqViz as a sequence viewer for Dseqrecord objects enhancement
#228 opened May 15, 2024 by BjornFJohansson
Overlapping restriction enzymes gives a value error. Hackathon-2024
#224 opened Apr 30, 2024 by BjornFJohansson
@BjornFJohansson
2
Improve typing of functions in 'crispr' module Hackathon-2024
#215 opened Mar 21, 2024 by dgruano
@dgruano @hiyama341
12
New assembly: option to add feature with assembly scars
#193 opened Jan 29, 2024 by manulera
3
Which assembly products are returned depends on the input order fixed-with-new-assembly-model
#192 opened Jan 29, 2024 by manulera
4
ProTip! Exclude everything labeled bug with -label:bug.