Use nf-core blastn #42

priyanka-surana · 2022-12-05T09:26:06Z

The blast/tblastn needs to be removed from sanger-tol and installed under nf-core. If not using, remove entirely.

From Matthieu:

motivated by reducing the amount of code you / we need to maintain

DLBPointon · 2022-12-05T13:40:46Z

BLAST* is no longer used, will be removed in the next round of updates.

priyanka-surana added the enhancement New feature or request label Dec 5, 2022

priyanka-surana mentioned this issue Dec 5, 2022

Modules restructuring #36

Closed

DLBPointon self-assigned this Dec 5, 2022

DLBPointon added a commit that referenced this issue Dec 5, 2022

First fixes for issues #47, #42, #40, #39, #37

8125a9e

DLBPointon added a commit that referenced this issue Dec 16, 2022

Issues #36, #37, #38, #39, #40, #41, #42, #46, #47 are effected.

17d692c

DLBPointon mentioned this issue Jan 10, 2023

Second round fixes #51

Merged

muffato linked a pull request Jan 19, 2023 that will close this issue

Second round fixes #51

Merged

muffato closed this as completed Jan 19, 2023

DLBPointon added a commit that referenced this issue Sep 7, 2023

Issues #36, #37, #38, #39, #40, #41, #42, #46, #47 are effected.

9c8ca68

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