A Scalable GPU-Based Whole Genome Aligner, published in SC20: https://doi.ieeecomputersociety.org/10.1109/SC41405.2020.00043
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Updated
Aug 7, 2024 - C++
A Scalable GPU-Based Whole Genome Aligner, published in SC20: https://doi.ieeecomputersociety.org/10.1109/SC41405.2020.00043
a block basis estimate of the whole genome alignment estimates
rust-samtools-genomeview
stitching coding regions from exon alignments for the protein to genome alignments.
genome and transcriptome alignment extraction
intergenic region analyzer from protein alignments to draft genomes.
formatting paf output alignments and plotting the paf alignments stats
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